Latest posts tagged with #Transcriptome on Bluesky
Function | New Article Alert! 🚨Dissanayake et al. describe time-of-day-, genotype-, and diet-dependent alterations in the #renal #transcriptome and #proteome associated with salt-sensitive #hypertension in #Per1 knock-out rats. 🐀 Read: https://ow.ly/AiJT50YEUxF
See the first #transcriptome and EST-SSR markers developed for 𝘊𝘢𝘮𝘦𝘭𝘭𝘪𝘢 𝘤𝘶𝘤𝘱𝘩𝘶𝘰𝘯𝘨𝘦𝘯𝘴𝘪𝘴, an #endangered golden #camellia from Vietnam threatened by #overharvesting and #habitat loss: doi.org/10.3897/BDJ....
A #genetically encoded device for #transcriptome #storage in #mammalian #cells | Science www.science.org/doi/10.1126/...
A large-scale single-cell #Transcriptome atlas reveals the complex immune landscape of #BacterialPneumonia, identifying distinct macrophage and neutrophil dynamics that contribute to #LungInflammation and repair.
#STTT #OpenAccess: doi.org/10.1038/s413...
Female-specific Cx3cr1-driven regulation of #ALS and #Alzheimer’s risk genes in #tauopathy
Ari Sudwarts & Gopal Thinakaran @thinakaran.bsky.social #microglia #transcriptome
link.springer.com/article/10.1...
Join the local Melbourne #illumina Field Apps team to specialise in #Bioinformatics. It's a great team, you get to play with #DRAGEN and help customers get the best data for analysis. #genomics #multiomics #singlecell #spatial #transcriptome #epigenetics bit.ly/46o4sRj
I can refer the right folks.
New paper uses a modified direct #RNA #nanopore sequencing framework (DRAP3R) to reveal expanded RNA polymerase III #transcriptome and epitranscriptome landscapes, including novel Pol III-transcribed RNAs. 🧬
📄 https://doi.org/10.1038/s41467-025-68230-1
👤 EVBC member: Daniel Depledge
New preprint out! We made a #Plasmodium knowlesi A1-H.1 #transcriptome time course for asexual blood stages🩸. tinyurl.com/mwd9b8vx
👩💻Webtool to compare temporal expression to P. vivax: tinyurl.com/bdz2ndsj
@itmantwerp.bsky.social @eknuepfer.bsky.social @cortesmalaria.bsky.social
Latest in #G3journal: A newly assembled de novo #transcriptome assembly from brain samples of Dryophytes arenicolor—a Canyon Treefrog—across different life stages identifies novel putative long non-coding RNAs (lncRNAs). buff.ly/RnGDZiO
🧬🔬@science.org A genetically encoded device for #transcriptome storage in mammalian cells | Science www.science.org/doi/10.1126/... @broadinstitute.org
New research in #RESMedVetEnt
Transposable elements in the #transcriptome of #Aedes (Stegomyia) aegypti (Linnaeus, 1762)
doi.org/10.1111/mve.70040
#TransposableElements #InsectVectors #VectorControl
@wileyeco.bsky.social
#JJC2026 Mathieu Delaeter (ULCO) on unravelling how #mycorrhizal inoculation shapes the #wheat foliar #transcriptome and enhances #resistance to #septoria tritici blotch
Genomic Crosstalk Between Nuclear Receptors in Hormone-dependent Cancers. Read more in #Endocrinology: bit.ly/4aiWdJ5 #NuclearReceptors #Cistrome #Transcriptome @endocrinesociety.bsky.social
Dear #spatial #transcriptome scientists, what would be an R based package/pipeline/function suggestion of yours regarding cell/trx niche determination after RCTD deconvolution?
Choline attenuates NEFA-induced hepatic steatosis via GNMT regulation in hepatocytes
Xueer Du, Lamei Wang ... Jianguo Wang, Yangchun Cao
link.springer.com/article/10.1...
#transcriptome #cow #animalscience
Open Public Resource in R2: The RNA Atlas, the most complete #mRNA resource assessed in 300 tissues / cell types. Explore it for yourself at:
r2platform.com/rna_atlas/
#science #Datavisualization #transcriptome #ncRNA
Researchers establish a full-length #gallbladder #transcriptome atlas using #LongReadSequencing and identify ERBB2 i14e as a novel isoform driving #TumorGrowth and trastuzumab resistance. #ERBB2 #antisense #medsky
#OpenAccess in #STTT: doi.org/10.1038/s413...
Open Public Resource in R2: The RNA Atlas, the most complete #mRNA resource assessed in 300 tissues / cell types. Explore it for yourself at:
r2platform.com/rna_atlas/
#science #Datavisualization #transcriptome #ncRNA
www.croiconference.org/wp-content/u...
link.springer.com/article/10.1...
www.sciencedirect.com/science/arti...
www.cell.com/molecular-th...
This study demonstrated significant #transcriptome differences in mononuclear cells & granulocytes between no known #COVID, acute COVID, COVID recovered,
💬 “The new expression atlas allowed us to independently predict and compare the gene content of the wheat cultivars."
🌾 Scientists have published the first wheat pan-transcriptome to reveal layers of hidden diversity spanning our modern #wheat variations.
💻🧬 #geneexpression #transcriptome #genesky
Pooled #CRISPR screens with joint single-nucleus #chromatin accessibility and #transcriptome profiling
h/t @albacorp7.bsky.social congratulations 🎉🍾
Model describing how daily rhythmic O-GlcNAc proteome integrates environmental and metabolic signals to regulate transcriptomic and physiological rhythms. Environmental cues signaling through the molecular clock and metabolic cues from feeding–fasting cycles regulate daily rhythms in the O-GlcNAc proteome. Rhythmic O-GlcNAcylation can directly shape daily rhythmicity in transcriptome and physiology. In addition, rhythmic O-GlcNAcylation can also interact with rhythmic phosphorylation. Different forms of crosstalk between O-GlcNAc proteome and phosphoproteome are shown in the middle box. The red solid arrows indicate the regulations described in this study, while the dashed arrow indicates regulations discovered by previous studies. Figure created using BioRender.com.
The liver #transcriptome is highly sensitive to metabolic cues. By characterizing nuclear protein #OGlcNAcylation in mouse #liver during the day, @joanna-chiu.bsky.social &co show how shifts in a nutrient-sensitive #PTM may shape transcriptional regulation @plosbiology.org 🧪 plos.io/3KuS7m1
Model describing how daily rhythmic O-GlcNAc proteome integrates environmental and metabolic signals to regulate transcriptomic and physiological rhythms. Environmental cues signaling through the molecular clock and metabolic cues from feeding–fasting cycles regulate daily rhythms in the O-GlcNAc proteome. Rhythmic O-GlcNAcylation can directly shape daily rhythmicity in transcriptome and physiology. In addition, rhythmic O-GlcNAcylation can also interact with rhythmic phosphorylation. Different forms of crosstalk between O-GlcNAc proteome and phosphoproteome are shown in the middle box. The red solid arrows indicate the regulations described in this study, while the dashed arrow indicates regulations discovered by previous studies. Figure created using BioRender.com.
The liver #transcriptome is highly sensitive to metabolic cues. By characterizing nuclear protein #OGlcNAcylation in mouse #liver during the day, @joanna-chiu.bsky.social &co show how shifts in a nutrient-sensitive #PTM may shape transcriptional regulation @plosbiology.org 🧪 plos.io/3KuS7m1
Model describing how daily rhythmic O-GlcNAc proteome integrates environmental and metabolic signals to regulate transcriptomic and physiological rhythms. Environmental cues signaling through the molecular clock and metabolic cues from feeding–fasting cycles regulate daily rhythms in the O-GlcNAc proteome. Rhythmic O-GlcNAcylation can directly shape daily rhythmicity in transcriptome and physiology. In addition, rhythmic O-GlcNAcylation can also interact with rhythmic phosphorylation. Different forms of crosstalk between O-GlcNAc proteome and phosphoproteome are shown in the middle box. The red solid arrows indicate the regulations described in this study, while the dashed arrow indicates regulations discovered by previous studies. Figure created using BioRender.com.
The liver #transcriptome is highly sensitive to metabolic cues. By characterizing nuclear protein #OGlcNAcylation in mouse #liver during the day, @joanna-chiu.bsky.social &co show how shifts in a nutrient-sensitive #PTM may shape transcriptional regulation @plosbiology.org 🧪 plos.io/3KuS7m1
New in the September issue of #G3journal: Lei et al. reanalyzed #transcriptome data from thousands of #maize to uncover the genetics underlying maize complex traits, and built a multi-tissue regulatory atlas for functional validation and genomic improvements. buff.ly/nLTUrTm
A research team published their findings in Horticulture Research. The study investigated how non-photosynthetic grapevine cells adapt to glucose deprivation.
#DNA methylation #Transcriptome
Details: doi.org/10.1093/hr/u...
New in #G3journal: Lei et al. reanalyzed #transcriptome data from thousands of #maize panels to uncover the genetics underlying maize complex traits, and built a multi-tissue regulatory atlas for functional validation and genomic improvements. buff.ly/9PUe5CW
Graphic showing a Circos plot of the genome and a drawing of the medicinal plant Hemiboea subcapitata, with "Facultative adaptation" underneath it and dashed lines to either side. The left side reads "non-karst" and leads to a bar graph depicting whole-genome duplications. the right side reads "karst" and leads to a diagram of gene regulation, showing various players forming MBW complexes.
Wang et al. explore #adaptation to #karst geology in the medicinal plant Hemiboea subcapitata using a #chromosome level #genome and #transcriptome analysis, revealing effects on flavonoid metabolism. #plantscience #evolution
doi.org/10.1111/jse....
Full-length #Transcriptome revealed a new isoform, ERBB2-i14e, associated with #GallbladderCancer (GBC) progression, worse #prognosis, & #Trastuzumab resistance, highlighting it as a #Biomarker & #TherapeuticTarget for GBC. #medsky
#STTT #OpenAccess: doi.org/10.1038/s413...
Molecular dissection of Xinong 511 spike rachis response to Fusarium head blight infection
Xiaoying Yang, Maoru Xu ... Chunhuan Chen, Wanquan Ji
link.springer.com/article/10.1...
#FHB #transcriptome #DiseaseResistance #PlantImmunity
